GOLDMARK: Public Computational Pathology Portal

Stage Summary Pipeline status at a glance Pipeline

Features
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Inference
No inference results detected
Manifest
462 rows, 11 columns
Tiling
Tiling directory present; assuming complete coverage
Training
Training directory present but no classification reports found

Case Summary Track cohort coverage by encoder Cohort

Cases Inspect case-level tiles and encoders Cases

Manifest Overview Preview the manifest and target distribution Manifest

462 rows · 11 columns

Target: DETAILEDTUMORTYPE Target: GENERALTUMORTYPE Target: ONCOTREE_CODE Target: SAMPLETYPE Target: PRIMARYSITE Target: METASTASISSITE Target: CANCER.TYPE.ORIGINAL Target: CANCER.TYPE Target: SCANNED_SLIDES_EXIST

DMP_ASSAY_ID	DetailedTumorType	GeneralTumorType	OncoTree_Code	SampleType	PrimarySite	MetastasisSite	Cancer.Type.Original	Cancer.Type	scanned_slides_exist	file_name
C3N-04113-23	Glioblastoma Multiforme	Brain Cancer	GBM	Primary	Brain	Not Applicable	Glioblastoma Multiforme	Glioblastoma Multiforme	True	C3N-04113-23.svs
C3N-03180-23	Glioblastoma Multiforme	Brain Cancer	GBM	Primary	Brain	Not Applicable	Glioblastoma Multiforme	Glioblastoma Multiforme	True	C3N-03180-23.svs
C3L-02707-24	Glioblastoma Multiforme	Brain Cancer	GBM	Primary	Brain	Not Applicable	Glioblastoma Multiforme	Glioblastoma Multiforme	True	C3L-02707-24.svs
C3L-04038-23	Glioblastoma Multiforme	Brain Cancer	GBM	Primary	Brain	Not Applicable	Glioblastoma Multiforme	Glioblastoma Multiforme	True	C3L-04038-23.svs
C3L-02642-23	Glioblastoma Multiforme	Brain Cancer	GBM	Primary	Brain	Not Applicable	Glioblastoma Multiforme	Glioblastoma Multiforme	True	C3L-02642-23.svs

Cross-Validation Performance Compare experiments across validation splits Validation

External Inference Diagnostics Interactive ROC/PR curves for each external inference experiment Inference