GOLDMARK: Public Computational Pathology Portal

Stage Summary Pipeline status at a glance Pipeline

Features
Feature scan disabled for faster page loads
Inference
No inference results detected
Manifest
307 rows, 11 columns
Tiling
Tiling directory present; assuming complete coverage
Training
Training directory present but no classification reports found

Case Summary Track cohort coverage by encoder Cohort

Cases Inspect case-level tiles and encoders Cases

Manifest Overview Preview the manifest and target distribution Manifest

307 rows · 11 columns

Target: DETAILEDTUMORTYPE Target: GENERALTUMORTYPE Target: ONCOTREE_CODE Target: SAMPLETYPE Target: PRIMARYSITE Target: METASTASISSITE Target: CANCER.TYPE.ORIGINAL Target: CANCER.TYPE Target: SCANNED_SLIDES_EXIST

DMP_ASSAY_ID	DetailedTumorType	GeneralTumorType	OncoTree_Code	SampleType	PrimarySite	MetastasisSite	Cancer.Type.Original	Cancer.Type	scanned_slides_exist	file_name
C3L-03253-21	Sarcoma	Sarcoma	SARC	Primary	Soft Tissue	Not Applicable	Sarcoma	Sarcoma	True	C3L-03253-21.svs
C3N-03232-26	Sarcoma	Sarcoma	SARC	Primary	Soft Tissue	Not Applicable	Sarcoma	Sarcoma	True	C3N-03232-26.svs
C3L-01574-23	Sarcoma	Sarcoma	SARC	Primary	Soft Tissue	Not Applicable	Sarcoma	Sarcoma	True	C3L-01574-23.svs
C3L-04492-23	Sarcoma	Sarcoma	SARC	Primary	Soft Tissue	Not Applicable	Sarcoma	Sarcoma	True	C3L-04492-23.svs
C3N-03615-22	Sarcoma	Sarcoma	SARC	Primary	Soft Tissue	Not Applicable	Sarcoma	Sarcoma	True	C3N-03615-22.svs

Cross-Validation Performance Compare experiments across validation splits Validation

External Inference Diagnostics Interactive ROC/PR curves for each external inference experiment Inference