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GBM

Last updated 2026-01-15 01:57 · Cached 2026-02-08 16:57

Features Inference Manifest Tiling Training

Stage Summary Pipeline status at a glance Pipeline

Features
Encoders detected: gigapath_ft (816 files), h-optimus-0 (816 files), prov-gigapath (816 files), uni (816 files), virchow (816 files), virchow2 (816 files)
Inference
360 prediction(s) · 115 positive label(s) · dataset tcga
Manifest
816 rows, 11 columns
Tiling
Tiling manifest covers 816 case(s)
Training
30 training run(s)

Case Summary Track cohort coverage by encoder Cohort

Cases Inspect case-level tiles and encoders Cases

Manifest Overview Preview the manifest and target distribution Manifest

816 rows · 9 columns

Target: PTEN_BINARY Target: PTEN

slide_id	PTEN_binary	DMP_ASSAY_ID	split_1	split_2	split_3	split_4	split_5	PTEN
P-0000378-T01-IM3	0	P-0000378-T01-IM3	test	test	train	train	train	Negative
P-0000651-T01-IM3	0	P-0000651-T01-IM3	test	test	train	train	test	Negative
P-0000677-T01-IM3	0	P-0000677-T01-IM3	train	train	test	train	train	Negative
P-0000758-T01-IM3	0	P-0000758-T01-IM3	train	test	train	train	test	Negative
P-0000759-T01-IM3	1	P-0000759-T01-IM3	train	test	train	train	test	Positive

Cross-Validation Performance Compare experiments across validation splits Validation

External Inference Diagnostics Interactive ROC/PR curves for each external inference experiment Inference