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TGCT

Last updated 2026-01-15 01:59 · Cached 2026-02-08 16:57

Features Inference Manifest Tiling Training

Stage Summary Pipeline status at a glance Pipeline

Features
Encoders detected: gigapath_ft (427 files), h-optimus-0 (427 files), prov-gigapath (427 files), uni (427 files), virchow (427 files), virchow2 (427 files)
Inference
215 prediction(s) · 35 positive label(s) · dataset tcga
Manifest
427 rows, 11 columns
Tiling
Tiling manifest covers 427 case(s)
Training
90 training run(s)

Case Summary Track cohort coverage by encoder Cohort

Cases Inspect case-level tiles and encoders Cases

Manifest Overview Preview the manifest and target distribution Manifest

Download CSV

427 rows · 9 columns

Target: KIT_BINARY Target: KIT

slide_id	DMP_ASSAY_ID	split_1	split_2	split_3	split_4	split_5	KIT
P-0000095-T01-IM3	P-0000095-T01-IM3	train	test	train	train	train	Negative
P-0000108-T01-IM3	P-0000108-T01-IM3	train	test	test	test	train	Negative
P-0000123-T01-IM3	P-0000123-T01-IM3	train	train	train	train	test	Negative
P-0000151-T01-IM3	P-0000151-T01-IM3	train	test	train	train	train	Negative
P-0000161-T01-IM3	P-0000161-T01-IM3	test	train	train	test	train	Negative

Cross-Validation Performance Compare experiments across validation splits Validation

Training Runs Artifacts and metrics for each experiment Experiments

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Model	Target	Aggregator	Split	Epoch 200	Macro AUC	Macro BER	Macro FPR	Macro FNR	Artifact
h-optimus-0	KIT	GMA PUB	split_2	120	0.7132429614181439	0.4358706986444212	0.0145985401459854	0.8571428571428571	`cumulative_results.csv`
h-optimus-0	KIT	GMA PUB	split_1	120	0.7122002085505735	0.5072992700729927	0.0145985401459854	1.0	`cumulative_results.csv`
virchow2	KIT	GMA PUB	split_4	120	0.674436090225564	0.4612781954887218	0.0225563909774436	0.9	`cumulative_results.csv`
virchow	KIT	GMA PUB	split_5	120	0.5850840336134454	0.5073529411764706	0.0147058823529411	1.0	`cumulative_results.csv`
gigapath_ft	KIT	GMA PUB	split_5	120	0.4506302521008403	0.5073529411764706	0.0147058823529411	1.0	`cumulative_results.csv`
prov-gigapath	KIT	GMA PUB	split_2	120	0.6824817518248175	0.3644421272158498	0.0145985401459854	0.7142857142857143	`cumulative_results.csv`
h-optimus-0	KIT	GMA PUB	split_5	120	0.5609243697478992	0.5	0.0	1.0	`cumulative_results.csv`
prov-gigapath	KIT	GMA PUB	split_3	120	0.7092592592592593	0.4412037037037037	0.0074074074074074	0.875	`cumulative_results.csv`
h-optimus-0	KIT	GMA PUB	split_4	120	0.6842105263157895	0.5037593984962406	0.0075187969924812	1.0	`cumulative_results.csv`
virchow2	KIT	GMA PUB	split_5	120	0.7247899159663865	0.4359243697478991	0.0147058823529411	0.8571428571428571	`cumulative_results.csv`
virchow2	KIT	GMA PUB	split_2	120	0.8175182481751824	0.4322210636079249	0.0072992700729927	0.8571428571428571	`cumulative_results.csv`
uni	KIT	GMA PUB	split_1	120	0.6871741397288843	0.5109489051094891	0.0218978102189781	1.0	`cumulative_results.csv`
virchow2	KIT	GMA PUB	split_5	120	0.7247899159663865	0.4359243697478991	0.0147058823529411	0.8571428571428571	`cumulative_results.csv`
prov-gigapath	KIT	GMA PUB	split_5	120	0.509453781512605	0.5036764705882353	0.0073529411764705	1.0	`cumulative_results.csv`
gigapath_ft	KIT	GMA PUB	split_5	120	0.4506302521008403	0.5073529411764706	0.0147058823529411	1.0	`cumulative_results.csv`
uni	KIT	GMA PUB	split_1	120	0.6871741397288843	0.5109489051094891	0.0218978102189781	1.0	`cumulative_results.csv`
virchow	KIT	GMA PUB	split_2	120	0.5901981230448383	0.5	0.0	1.0	`cumulative_results.csv`
prov-gigapath	KIT	GMA PUB	split_2	120	0.6824817518248175	0.3644421272158498	0.0145985401459854	0.7142857142857143	`cumulative_results.csv`
gigapath_ft	KIT	GMA PUB	split_1	120	0.6798748696558916	0.5036496350364964	0.0072992700729927	1.0	`cumulative_results.csv`
virchow	KIT	GMA PUB	split_3	120	0.4814814814814814	0.5074074074074074	0.0148148148148148	1.0	`cumulative_results.csv`
uni	KIT	GMA PUB	split_4	120	0.4917293233082707	0.5037593984962406	0.0075187969924812	1.0	`cumulative_results.csv`
uni	KIT	GMA PUB	split_2	120	0.5839416058394161	0.4358706986444212	0.0145985401459854	0.8571428571428571	`cumulative_results.csv`
prov-gigapath	KIT	GMA PUB	split_3	120	0.7092592592592593	0.4412037037037037	0.0074074074074074	0.875	`cumulative_results.csv`
uni	KIT	GMA PUB	split_3	120	0.5046296296296295	0.5148148148148148	0.0296296296296296	1.0	`cumulative_results.csv`
gigapath_ft	KIT	GMA PUB	split_2	120	0.6590198123044838	0.4322210636079249	0.0072992700729927	0.8571428571428571	`cumulative_results.csv`
h-optimus-0	KIT	GMA PUB	split_3	120	0.7000000000000001	0.5185185185185185	0.037037037037037	1.0	`cumulative_results.csv`
virchow2	KIT	GMA PUB	split_3	120	0.4990740740740741	0.5111111111111111	0.0222222222222222	1.0	`cumulative_results.csv`
virchow	KIT	GMA PUB	split_5	120	0.5850840336134454	0.5073529411764706	0.0147058823529411	1.0	`cumulative_results.csv`
gigapath_ft	KIT	GMA PUB	split_3	120	0.624074074074074	0.5074074074074074	0.0148148148148148	1.0	`cumulative_results.csv`
uni	KIT	GMA PUB	split_4	120	0.4917293233082707	0.5037593984962406	0.0075187969924812	1.0	`cumulative_results.csv`
virchow	KIT	GMA PUB	split_1	120	0.4744525547445255	0.5072992700729927	0.0145985401459854	1.0	`cumulative_results.csv`
h-optimus-0	KIT	GMA PUB	split_4	120	0.6842105263157895	0.5037593984962406	0.0075187969924812	1.0	`cumulative_results.csv`
h-optimus-0	KIT	GMA PUB	split_3	120	0.7000000000000001	0.5185185185185185	0.037037037037037	1.0	`cumulative_results.csv`
gigapath_ft	KIT	GMA PUB	split_1	120	0.6798748696558916	0.5036496350364964	0.0072992700729927	1.0	`cumulative_results.csv`
virchow	KIT	GMA PUB	split_2	120	0.5901981230448383	0.5	0.0	1.0	`cumulative_results.csv`
virchow2	KIT	GMA PUB	split_3	120	0.4990740740740741	0.5111111111111111	0.0222222222222222	1.0	`cumulative_results.csv`
uni	KIT	GMA PUB	split_2	120	0.5839416058394161	0.4358706986444212	0.0145985401459854	0.8571428571428571	`cumulative_results.csv`
virchow	KIT	GMA PUB	split_4	120	0.6075187969924811	0.5075187969924813	0.0150375939849624	1.0	`cumulative_results.csv`
virchow2	KIT	GMA PUB	split_4	120	0.674436090225564	0.4612781954887218	0.0225563909774436	0.9	`cumulative_results.csv`
prov-gigapath	KIT	GMA PUB	split_1	120	0.7382690302398331	0.5072992700729927	0.0145985401459854	1.0	`cumulative_results.csv`
virchow	KIT	GMA PUB	split_4	120	0.6075187969924811	0.5075187969924813	0.0150375939849624	1.0	`cumulative_results.csv`
virchow2	KIT	GMA PUB	split_1	120	0.6704900938477582	0.5072992700729927	0.0145985401459854	1.0	`cumulative_results.csv`
gigapath_ft	KIT	GMA PUB	split_2	120	0.6590198123044838	0.4322210636079249	0.0072992700729927	0.8571428571428571	`cumulative_results.csv`
virchow	KIT	GMA PUB	split_1	120	0.4744525547445255	0.5072992700729927	0.0145985401459854	1.0	`cumulative_results.csv`
gigapath_ft	KIT	GMA PUB	split_4	120	0.6353383458646616	0.5	0.0	1.0	`cumulative_results.csv`
h-optimus-0	KIT	GMA PUB	split_2	120	0.7132429614181439	0.4358706986444212	0.0145985401459854	0.8571428571428571	`cumulative_results.csv`
prov-gigapath	KIT	GMA PUB	split_4	120	0.5684210526315789	0.5037593984962406	0.0075187969924812	1.0	`cumulative_results.csv`
virchow2	KIT	GMA PUB	split_1	120	0.6704900938477582	0.5072992700729927	0.0145985401459854	1.0	`cumulative_results.csv`
gigapath_ft	KIT	GMA PUB	split_3	120	0.624074074074074	0.5074074074074074	0.0148148148148148	1.0	`cumulative_results.csv`
uni	KIT	GMA PUB	split_5	120	0.4779411764705882	0.5073529411764706	0.0147058823529411	1.0	`cumulative_results.csv`
prov-gigapath	KIT	GMA PUB	split_4	120	0.5684210526315789	0.5037593984962406	0.0075187969924812	1.0	`cumulative_results.csv`
h-optimus-0	KIT	GMA PUB	split_5	120	0.5609243697478992	0.5	0.0	1.0	`cumulative_results.csv`
prov-gigapath	KIT	GMA PUB	split_1	120	0.7382690302398331	0.5072992700729927	0.0145985401459854	1.0	`cumulative_results.csv`
prov-gigapath	KIT	GMA PUB	split_5	120	0.509453781512605	0.5036764705882353	0.0073529411764705	1.0	`cumulative_results.csv`
uni	KIT	GMA PUB	split_5	120	0.4779411764705882	0.5073529411764706	0.0147058823529411	1.0	`cumulative_results.csv`
virchow	KIT	GMA PUB	split_3	120	0.4814814814814814	0.5074074074074074	0.0148148148148148	1.0	`cumulative_results.csv`
gigapath_ft	KIT	GMA PUB	split_4	120	0.6353383458646616	0.5	0.0	1.0	`cumulative_results.csv`
h-optimus-0	KIT	GMA PUB	split_1	120	0.7122002085505735	0.5072992700729927	0.0145985401459854	1.0	`cumulative_results.csv`
virchow2	KIT	GMA PUB	split_2	120	0.8175182481751824	0.4322210636079249	0.0072992700729927	0.8571428571428571	`cumulative_results.csv`
uni	KIT	GMA PUB	split_3	120	0.5046296296296295	0.5148148148148148	0.0296296296296296	1.0	`cumulative_results.csv`

External Inference Diagnostics Interactive ROC/PR curves for each external inference experiment Inference